BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032C09SP1|AL429548
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1094 790 0.0
3x_Contig1807 504 e-142
>3x_Contig1094
Length = 4859
Score = 790 bits (397), Expect = 0.0
Identities = 404/405 (99%), Gaps = 1/405 (0%)
Strand = Plus / Plus
Query: 417 gaatctgctactgctgacccaggtcctgctgcatatcgtaaaggtggtcctttgactatc 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaatctgctactgctgacccaggtcctgctgcatatcgtaaaggtggtcctttgactatc 60
Query: 477 actgatgccaatcttttccttggtagactcgtaccggaattcttcccaagcatctttgga 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 actgatgccaatcttttccttggtagactcgtaccggaattcttcccaagcatctttgga 120
Query: 537 ccaaatgaagacgaaacactagatcttgagacaactactaaactgtttttagaactcacg 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccaaatgaagacgaaacactagatcttgagacaactactaaactgtttttagaactcacg 180
Query: 597 gatactatcaacaaggatctaaatgccaatttcacgcccgatgaaattgcttacggtttt 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gatactatcaacaaggatctaaatgccaatttcacgcccgatgaaattgcttacggtttt 240
Query: 657 ttgaaagtggccaacgaatcaatggcaagaccaattcgtgcaatcaccgaagccaaggga 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgaaagtggccaacgaatcaatggcaagaccaattcgtgcaatcaccgaagccaaggga 300
Query: 717 catgcagtacaaaaccacagactcgttacattttggtggtgcgggaggccaacatgcagt 776
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 catgcagtacaaaaccacagactcgttaca-tttggtggtgcgggaggccaacatgcagt 359
Query: 777 cgcagtggctaagtccttaggaatcaaagaagttttggcacacag 821
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 cgcagtggctaagtccttaggaatcaaagaagttttggcacacag 404
>3x_Contig1807
Length = 66587
Score = 504 bits (253), Expect = e-142
Identities = 257/259 (99%)
Strand = Plus / Plus
Query: 2 tagttcagtcgctgatgcttatttgactccggtaattaagaaatacctcgaaagtatcga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66228 tagttcagtcgctgatgcttatttgactccggtaattaagaaatacctcgaaagtatcga 66287
Query: 62 atctgggttaactaatgctgaaaatacaaacgttcaattcatgcaatcagatgggggttt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66288 atctgggttaactaatgctgaaaatacaaacgttcaattcatgcaatcagatgggggttt 66347
Query: 122 ggtagatgggaaaaaattctctgggttaaaatctatcttatcaggtccagctggtggtgt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66348 ggtagatgggaaaaaattctctgggttaaaatctatcttatcaggtccagctggtggtgt 66407
Query: 182 tgtcggatattcatctacttgttacgatgatgaaaataggawccccttgattggttttga 241
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 66408 tgtcggatattcatctacttgttacgatgatgaaaatacgatccccttgattggttttga 66467
Query: 242 tatgggtggtacttctacc 260
|||||||||||||||||||
Sbjct: 66468 tatgggtggtacttctacc 66486
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5365
Number of Sequences: 1807
Number of extensions: 5365
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 2
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)